Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC12.08□□□□□ -0.48
HttP42859 Gm9619-201ENSMUST00000211587 762 ntBASIC12.08□□□□□ -0.48
HttP42859 AC101205.2-201ENSMUST00000226206 715 ntBASIC12.08□□□□□ -0.48
HttP42859 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
HttP42859 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 AC124392.1-201ENSMUST00000225172 5324 ntBASIC12.08□□□□□ -0.48
HttP42859 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
HttP42859 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.07□□□□□ -0.48
HttP42859 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.07□□□□□ -0.48
HttP42859 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC12.07□□□□□ -0.48
HttP42859 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC12.07□□□□□ -0.48
HttP42859 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HttP42859 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
HttP42859 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Gm24066-201ENSMUST00000104515 131 ntBASIC12.07□□□□□ -0.48
HttP42859 Gm23908-201ENSMUST00000104599 132 ntBASIC12.07□□□□□ -0.48
HttP42859 Fthl17b-201ENSMUST00000105006 842 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
HttP42859 Gm11521-201ENSMUST00000143302 329 ntTSL 3 BASIC12.07□□□□□ -0.48
HttP42859 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.07□□□□□ -0.48
HttP42859 AC164978.2-201ENSMUST00000226645 857 ntBASIC12.07□□□□□ -0.48
HttP42859 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Scgb3a1-201ENSMUST00000043873 493 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Scgb3a1-202ENSMUST00000076006 598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
HttP42859 Gtf2e2-203ENSMUST00000171010 1664 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
HttP42859 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC12.06□□□□□ -0.48
HttP42859 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
HttP42859 Gm15476-201ENSMUST00000118247 1191 ntBASIC12.06□□□□□ -0.48
HttP42859 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC12.06□□□□□ -0.48
HttP42859 Fbxo16-201ENSMUST00000169656 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Elobl-202ENSMUST00000082339 300 ntBASIC12.06□□□□□ -0.48
HttP42859 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.06□□□□□ -0.48
HttP42859 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
HttP42859 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.06□□□□□ -0.48
HttP42859 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Scgb1b29-201ENSMUST00000108094 282 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gm9133-201ENSMUST00000118289 540 ntBASIC12.06□□□□□ -0.48
HttP42859 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm16480-201ENSMUST00000120439 832 ntBASIC12.06□□□□□ -0.48
HttP42859 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC12.06□□□□□ -0.48
HttP42859 Gm25154-201ENSMUST00000157123 119 ntBASIC12.06□□□□□ -0.48
HttP42859 1700028K03Rik-202ENSMUST00000159902 742 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
HttP42859 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HttP42859 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC12.06□□□□□ -0.48
HttP42859 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
HttP42859 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
HttP42859 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Gm5739-201ENSMUST00000208601 1703 ntBASIC12.06□□□□□ -0.48
HttP42859 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.06□□□□□ -0.48
HttP42859 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HttP42859 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms