Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC102327.1-201ENSMUST00000226389 742 ntBASIC17.21■□□□□ 0.35
Chd1P40201 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd1P40201 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chd1P40201 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Chd1P40201 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Rnf216-209ENSMUST00000200607 3704 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 AC148324.1-201ENSMUST00000219034 4240 ntBASIC17.2■□□□□ 0.34
Chd1P40201 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Snx10-202ENSMUST00000114439 968 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Gm13580-201ENSMUST00000131457 566 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Mir3100-201ENSMUST00000174918 65 ntBASIC17.2■□□□□ 0.34
Chd1P40201 Mir3091-201ENSMUST00000175086 76 ntBASIC17.2■□□□□ 0.34
Chd1P40201 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Gm18124-201ENSMUST00000210695 706 ntBASIC17.2■□□□□ 0.34
Chd1P40201 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC17.2■□□□□ 0.34
Chd1P40201 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC17.2■□□□□ 0.34
Chd1P40201 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC17.2■□□□□ 0.34
Chd1P40201 Gm42858-201ENSMUST00000202512 1704 ntBASIC17.2■□□□□ 0.34
Chd1P40201 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Chd1P40201 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd1P40201 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Chd1P40201 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
Chd1P40201 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Chn2-209ENSMUST00000146114 1227 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Mir8111-201ENSMUST00000184463 137 ntBASIC17.19■□□□□ 0.34
Chd1P40201 Med11-201ENSMUST00000019067 902 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Gm42133-201ENSMUST00000196076 637 ntTSL 3 BASIC17.19■□□□□ 0.34
Chd1P40201 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC17.19■□□□□ 0.34
Chd1P40201 CU025215.1-201ENSMUST00000222986 603 ntBASIC17.19■□□□□ 0.34
Chd1P40201 AC134793.1-202ENSMUST00000227444 803 ntBASIC17.19■□□□□ 0.34
Chd1P40201 Gal-201ENSMUST00000025842 712 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC17.19■□□□□ 0.34
Chd1P40201 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Gm42815-201ENSMUST00000198787 1470 ntBASIC17.19■□□□□ 0.34
Chd1P40201 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Chd1P40201 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Gm5311-201ENSMUST00000203518 709 ntBASIC17.18■□□□□ 0.34
Chd1P40201 4930458K08Rik-201ENSMUST00000219952 1264 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 AC127583.1-201ENSMUST00000224351 540 ntBASIC17.18■□□□□ 0.34
Chd1P40201 AC141884.2-201ENSMUST00000228811 775 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Chd1P40201 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Chd1P40201 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Gm45546-201ENSMUST00000211053 2394 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Sfxn1-201ENSMUST00000021930 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Gm29101-201ENSMUST00000188329 1471 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Gm14650-201ENSMUST00000120400 889 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Mup-ps29-201ENSMUST00000122281 202 ntBASIC17.18■□□□□ 0.34
Chd1P40201 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Gm4960-201ENSMUST00000182928 1001 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Gm33570-201ENSMUST00000207608 1254 ntTSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Gm10020-201ENSMUST00000081993 612 ntBASIC17.18■□□□□ 0.34
Chd1P40201 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
Chd1P40201 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Chd1P40201 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 124.3 ms