Protein–RNA interactions for Protein: P32043

Hoxc5, Homeobox protein Hox-C5, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc5P32043 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm14109-201ENSMUST00000118814 309 ntBASIC10.89□□□□□ -0.67
Hoxc5P32043 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm43630-201ENSMUST00000201550 776 ntBASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm4607-201ENSMUST00000206649 577 ntBASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm45691-201ENSMUST00000206905 1120 ntBASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.89□□□□□ -0.67
Hoxc5P32043 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Hoxc5P32043 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm8885-201ENSMUST00000189382 598 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc5P32043 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Hoxc5P32043 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.88□□□□□ -0.67
Hoxc5P32043 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.88□□□□□ -0.67
Hoxc5P32043 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Hoxc5P32043 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm10152-201ENSMUST00000193475 1344 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 AC173482.6-201ENSMUST00000225889 1741 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 BC043934-202ENSMUST00000185694 2356 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Hoxc5P32043 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm38266-201ENSMUST00000194931 421 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm19187-201ENSMUST00000206781 892 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm45224-201ENSMUST00000208203 414 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm45598-202ENSMUST00000210719 986 ntBASIC10.87□□□□□ -0.67
Hoxc5P32043 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms