Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.79□□□□□ -0.52
RxrbP28704 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RxrbP28704 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RxrbP28704 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Cish-204ENSMUST00000168260 2742 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.78□□□□□ -0.52
RxrbP28704 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm5419-201ENSMUST00000119301 527 ntBASIC11.78□□□□□ -0.52
RxrbP28704 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.78□□□□□ -0.52
RxrbP28704 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.78□□□□□ -0.52
RxrbP28704 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.78□□□□□ -0.52
RxrbP28704 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.78□□□□□ -0.52
RxrbP28704 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.78□□□□□ -0.52
RxrbP28704 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
RxrbP28704 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
RxrbP28704 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
RxrbP28704 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.78□□□□□ -0.52
RxrbP28704 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm38271-201ENSMUST00000192296 1603 ntBASIC11.78□□□□□ -0.52
RxrbP28704 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.78□□□□□ -0.52
RxrbP28704 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RxrbP28704 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RxrbP28704 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
RxrbP28704 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RxrbP28704 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
RxrbP28704 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
RxrbP28704 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
RxrbP28704 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RxrbP28704 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RxrbP28704 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 Gm13829-201ENSMUST00000119600 138 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.77□□□□□ -0.53
RxrbP28704 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.77□□□□□ -0.53
RxrbP28704 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
RxrbP28704 Gm5370-201ENSMUST00000187187 574 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Gm37008-201ENSMUST00000195712 319 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Gm18893-201ENSMUST00000198416 943 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Gm42790-201ENSMUST00000201268 969 ntBASIC11.77□□□□□ -0.53
RxrbP28704 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 AC159896.2-201ENSMUST00000214753 269 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Ccdc93-202ENSMUST00000112621 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.77□□□□□ -0.53
RxrbP28704 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.77□□□□□ -0.53
RxrbP28704 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
RxrbP28704 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RxrbP28704 Ccar2-201ENSMUST00000035612 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms