Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.2□□□□□ -0.46
H2afxP27661 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.2□□□□□ -0.46
H2afxP27661 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
H2afxP27661 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
H2afxP27661 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
H2afxP27661 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
H2afxP27661 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC12.2□□□□□ -0.46
H2afxP27661 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afxP27661 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
H2afxP27661 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
H2afxP27661 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afxP27661 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
H2afxP27661 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 AA474408-201ENSMUST00000098110 3339 ntBASIC12.19□□□□□ -0.46
H2afxP27661 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
H2afxP27661 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.19□□□□□ -0.46
H2afxP27661 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
H2afxP27661 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
H2afxP27661 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Gm27397-201ENSMUST00000184997 107 ntBASIC12.19□□□□□ -0.46
H2afxP27661 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.19□□□□□ -0.46
H2afxP27661 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.19□□□□□ -0.46
H2afxP27661 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.19□□□□□ -0.46
H2afxP27661 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Dzip1l-203ENSMUST00000112885 4350 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Igsf6-201ENSMUST00000047194 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Nr1i2-201ENSMUST00000023504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
H2afxP27661 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Immt-206ENSMUST00000166975 2469 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
H2afxP27661 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Zfp940-202ENSMUST00000108223 2560 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
H2afxP27661 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.18□□□□□ -0.46
H2afxP27661 Gm12203-201ENSMUST00000118235 598 ntBASIC12.18□□□□□ -0.46
H2afxP27661 Gm12209-201ENSMUST00000120089 596 ntBASIC12.18□□□□□ -0.46
H2afxP27661 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
H2afxP27661 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.18□□□□□ -0.46
H2afxP27661 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Gm18187-201ENSMUST00000196476 984 ntBASIC12.18□□□□□ -0.46
H2afxP27661 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC12.18□□□□□ -0.46
H2afxP27661 Gm43966-201ENSMUST00000203301 612 ntBASIC12.18□□□□□ -0.46
H2afxP27661 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.18□□□□□ -0.46
H2afxP27661 Gm19994-201ENSMUST00000217086 586 ntBASIC12.18□□□□□ -0.46
H2afxP27661 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afxP27661 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
H2afxP27661 Pla2g4a-201ENSMUST00000070200 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.18□□□□□ -0.46
H2afxP27661 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
H2afxP27661 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms