Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Slc45a1-202ENSMUST00000117997 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
VimP20152 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.86□□□□□ -0.51
VimP20152 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gm12151-201ENSMUST00000121374 290 ntBASIC11.86□□□□□ -0.51
VimP20152 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.86□□□□□ -0.51
VimP20152 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gm26308-201ENSMUST00000157768 69 ntBASIC11.86□□□□□ -0.51
VimP20152 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Gm5781-201ENSMUST00000219792 443 ntBASIC11.86□□□□□ -0.51
VimP20152 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.86□□□□□ -0.51
VimP20152 Gm10146-201ENSMUST00000072739 309 ntBASIC11.86□□□□□ -0.51
VimP20152 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Rsph10b-203ENSMUST00000166847 2878 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 P2ry1-202ENSMUST00000193201 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.86□□□□□ -0.51
VimP20152 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.86□□□□□ -0.51
VimP20152 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
VimP20152 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VimP20152 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
VimP20152 Gm18806-201ENSMUST00000207607 1775 ntBASIC11.85□□□□□ -0.51
VimP20152 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.85□□□□□ -0.51
VimP20152 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.85□□□□□ -0.51
VimP20152 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.85□□□□□ -0.51
VimP20152 Gm10156-201ENSMUST00000122364 462 ntBASIC11.85□□□□□ -0.51
VimP20152 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC11.85□□□□□ -0.51
VimP20152 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Mir8102-201ENSMUST00000184148 139 ntBASIC11.85□□□□□ -0.51
VimP20152 Gm37497-201ENSMUST00000195830 798 ntBASIC11.85□□□□□ -0.51
VimP20152 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
VimP20152 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.85□□□□□ -0.51
VimP20152 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.85□□□□□ -0.51
VimP20152 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.85□□□□□ -0.51
VimP20152 AC125117.1-201ENSMUST00000228121 468 ntBASIC11.85□□□□□ -0.51
VimP20152 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
VimP20152 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.85□□□□□ -0.51
VimP20152 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.85□□□□□ -0.51
VimP20152 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
VimP20152 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC11.84□□□□□ -0.51
VimP20152 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
VimP20152 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Pomt1-201ENSMUST00000036473 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
VimP20152 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.84□□□□□ -0.51
VimP20152 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
VimP20152 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
VimP20152 Gm8213-201ENSMUST00000118191 441 ntBASIC11.84□□□□□ -0.51
VimP20152 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms