Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Col3a1P08121 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col3a1P08121 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.85□□□□□ -0.19
Col3a1P08121 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC13.85□□□□□ -0.19
Col3a1P08121 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm5621-201ENSMUST00000187303 640 ntBASIC13.85□□□□□ -0.19
Col3a1P08121 Gm19587-201ENSMUST00000191395 545 ntBASIC13.85□□□□□ -0.19
Col3a1P08121 Gm44323-201ENSMUST00000198689 129 ntBASIC13.85□□□□□ -0.19
Col3a1P08121 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Col3a1P08121 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Col3a1P08121 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Col3a1P08121 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col3a1P08121 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 Gm12969-201ENSMUST00000120199 1004 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm43002-201ENSMUST00000200310 155 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 Mt1-202ENSMUST00000211807 1085 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm18514-201ENSMUST00000218980 436 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col3a1P08121 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm25201-201ENSMUST00000083093 170 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC13.84□□□□□ -0.19
Col3a1P08121 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.84□□□□□ -0.19
Col3a1P08121 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Col3a1P08121 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
Col3a1P08121 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.19
Col3a1P08121 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col3a1P08121 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col3a1P08121 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Col3a1P08121 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Col3a1P08121 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm15617-201ENSMUST00000118973 771 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Col3a1P08121 Gm7082-201ENSMUST00000209880 969 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Col3a1P08121 AC159002.1-201ENSMUST00000226714 924 ntBASIC13.83□□□□□ -0.2
Col3a1P08121 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms