Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TnfP06804 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
TnfP06804 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
TnfP06804 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TnfP06804 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Gm12208-201ENSMUST00000122004 163 ntBASIC12.44□□□□□ -0.42
TnfP06804 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.44□□□□□ -0.42
TnfP06804 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC12.44□□□□□ -0.42
TnfP06804 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
TnfP06804 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC12.44□□□□□ -0.42
TnfP06804 Gm37981-201ENSMUST00000194280 535 ntBASIC12.44□□□□□ -0.42
TnfP06804 Gm5542-201ENSMUST00000195485 1089 ntBASIC12.44□□□□□ -0.42
TnfP06804 Gm8365-201ENSMUST00000197334 648 ntBASIC12.44□□□□□ -0.42
TnfP06804 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TnfP06804 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TnfP06804 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
TnfP06804 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Gm43773-201ENSMUST00000198548 2162 ntBASIC12.44□□□□□ -0.42
TnfP06804 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.44□□□□□ -0.42
TnfP06804 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
TnfP06804 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
TnfP06804 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TnfP06804 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
TnfP06804 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.43□□□□□ -0.42
TnfP06804 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.43□□□□□ -0.42
TnfP06804 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TnfP06804 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
TnfP06804 Gm10731-201ENSMUST00000181171 448 ntBASIC12.43□□□□□ -0.42
TnfP06804 Gm3551-201ENSMUST00000190750 664 ntBASIC12.43□□□□□ -0.42
TnfP06804 AC154257.1-202ENSMUST00000224729 843 ntBASIC12.43□□□□□ -0.42
TnfP06804 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.43□□□□□ -0.42
TnfP06804 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
TnfP06804 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
TnfP06804 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.43□□□□□ -0.42
TnfP06804 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
TnfP06804 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
TnfP06804 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.42□□□□□ -0.42
TnfP06804 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
TnfP06804 Gm25076-201ENSMUST00000104098 132 ntBASIC12.42□□□□□ -0.42
TnfP06804 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.42□□□□□ -0.42
TnfP06804 Gm9089-201ENSMUST00000122027 526 ntBASIC12.42□□□□□ -0.42
TnfP06804 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
TnfP06804 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.42□□□□□ -0.42
TnfP06804 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
TnfP06804 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms