Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Hoxa4P06798 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm8737-201ENSMUST00000122208 642 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm43002-201ENSMUST00000200310 155 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 AC211878.3-201ENSMUST00000222629 2018 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.55□□□□□ -0.56
Hoxa4P06798 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.55□□□□□ -0.56
Hoxa4P06798 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Hoxa4P06798 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm13408-201ENSMUST00000119822 798 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm13935-201ENSMUST00000121859 798 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm7150-201ENSMUST00000122032 981 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm22144-201ENSMUST00000157402 102 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 Fbxw4-203ENSMUST00000160003 387 ntTSL 3 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm20426-201ENSMUST00000173657 440 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.54□□□□□ -0.56
Hoxa4P06798 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Hoxa4P06798 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Gm17831-201ENSMUST00000205579 900 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Hoxa4P06798 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.54□□□□□ -0.56
Hoxa4P06798 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 204.9 ms