Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxa3P02831 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC9.88□□□□□ -0.83
Hoxa3P02831 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Gm43267-201ENSMUST00000199664 1796 ntBASIC9.88□□□□□ -0.83
Hoxa3P02831 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Hoxa3P02831 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.88□□□□□ -0.83
Hoxa3P02831 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm12857-201ENSMUST00000117678 592 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm13408-201ENSMUST00000119822 798 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm8566-201ENSMUST00000120174 465 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm13935-201ENSMUST00000121859 798 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm8956-201ENSMUST00000203939 825 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm9797-202ENSMUST00000218003 294 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 CT009718.3-201ENSMUST00000221116 367 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm1821-202ENSMUST00000227415 750 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 AC173482.6-201ENSMUST00000225889 1741 ntBASIC9.87□□□□□ -0.83
Hoxa3P02831 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Hoxa3P02831 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Hoxa3P02831 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm14724-201ENSMUST00000118400 537 ntBASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm8199-201ENSMUST00000121323 823 ntBASIC9.86□□□□□ -0.83
Hoxa3P02831 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm10051-201ENSMUST00000145209 414 ntBASIC9.86□□□□□ -0.83
Hoxa3P02831 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Hoxa3P02831 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms