Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
IghmP01872 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.96□□□□□ -0.66
IghmP01872 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.96□□□□□ -0.66
IghmP01872 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
IghmP01872 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.96□□□□□ -0.66
IghmP01872 Gm21939-201ENSMUST00000221137 2773 ntBASIC10.96□□□□□ -0.66
IghmP01872 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
IghmP01872 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.96□□□□□ -0.66
IghmP01872 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
IghmP01872 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.95□□□□□ -0.66
IghmP01872 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.95□□□□□ -0.66
IghmP01872 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
IghmP01872 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
IghmP01872 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.95□□□□□ -0.66
IghmP01872 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Gm43184-201ENSMUST00000197247 542 ntBASIC10.95□□□□□ -0.66
IghmP01872 Gm44364-201ENSMUST00000198368 141 ntBASIC10.95□□□□□ -0.66
IghmP01872 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Rps4l-202ENSMUST00000204242 789 ntBASIC10.95□□□□□ -0.66
IghmP01872 Gm17812-201ENSMUST00000204935 318 ntBASIC10.95□□□□□ -0.66
IghmP01872 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
IghmP01872 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Gm7940-201ENSMUST00000218195 769 ntBASIC10.95□□□□□ -0.66
IghmP01872 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
IghmP01872 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC10.95□□□□□ -0.66
IghmP01872 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
IghmP01872 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Gm36940-201ENSMUST00000194281 2036 ntBASIC10.94□□□□□ -0.66
IghmP01872 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.94□□□□□ -0.66
IghmP01872 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
IghmP01872 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.94□□□□□ -0.66
IghmP01872 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
IghmP01872 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC10.94□□□□□ -0.66
IghmP01872 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.94□□□□□ -0.66
IghmP01872 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC10.94□□□□□ -0.66
IghmP01872 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
IghmP01872 Gm44967-201ENSMUST00000207047 631 ntBASIC10.94□□□□□ -0.66
IghmP01872 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
IghmP01872 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
IghmP01872 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.94□□□□□ -0.66
IghmP01872 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
IghmP01872 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms