Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Gm11989-201ENSMUST00000117240 672 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Gm11362-201ENSMUST00000118838 850 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Gm14017-201ENSMUST00000121934 386 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC11.27□□□□□ -0.61
Hcn1O88704 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hcn1O88704 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hcn1O88704 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Hcn1O88704 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Crry-ps-201ENSMUST00000079090 1309 ntBASIC11.27□□□□□ -0.61
Hcn1O88704 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
Hcn1O88704 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Hcn1O88704 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.27□□□□□ -0.61
Hcn1O88704 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Hcn1O88704 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.26□□□□□ -0.61
Hcn1O88704 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hcn1O88704 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hcn1O88704 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.26□□□□□ -0.61
Hcn1O88704 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Gm13996-201ENSMUST00000118456 430 ntBASIC11.26□□□□□ -0.61
Hcn1O88704 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.26□□□□□ -0.61
Hcn1O88704 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC11.26□□□□□ -0.61
Hcn1O88704 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.26□□□□□ -0.61
Hcn1O88704 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Gm8913-201ENSMUST00000209491 641 ntBASIC11.26□□□□□ -0.61
Hcn1O88704 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.26□□□□□ -0.61
Hcn1O88704 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.26□□□□□ -0.61
Hcn1O88704 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Hcn1O88704 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Hcn1O88704 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Hcn1O88704 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Hcn1O88704 Gm12997-201ENSMUST00000120207 640 ntBASIC11.25□□□□□ -0.61
Hcn1O88704 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC11.25□□□□□ -0.61
Hcn1O88704 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.25□□□□□ -0.61
Hcn1O88704 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms