Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.95□□□□□ -0.02
Ubr1O70481 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ubr1O70481 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm44755-201ENSMUST00000207830 2102 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Snord17-201ENSMUST00000104526 238 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm5257-201ENSMUST00000121823 790 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Mup-ps29-201ENSMUST00000122281 202 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm26647-201ENSMUST00000180816 1255 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm18801-201ENSMUST00000186616 536 ntBASIC14.94□□□□□ -0.02
Ubr1O70481 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ubr1O70481 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Ubr1O70481 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.94□□□□□ -0.02
Ubr1O70481 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC14.94□□□□□ -0.02
Ubr1O70481 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ubr1O70481 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ubr1O70481 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm13039-201ENSMUST00000118638 794 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm12129-201ENSMUST00000120104 1147 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.93□□□□□ -0.02
Ubr1O70481 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm27956-201ENSMUST00000175604 260 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm4753-201ENSMUST00000188327 1255 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm5267-201ENSMUST00000191574 1045 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm7902-201ENSMUST00000198842 947 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm42867-201ENSMUST00000202995 469 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ubr1O70481 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Adgrv1-214ENSMUST00000224088 1492 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Ubr1O70481 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
Ubr1O70481 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Ubr1O70481 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ubr1O70481 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm25569-201ENSMUST00000157175 131 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Gm17214-201ENSMUST00000164501 541 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 Scgb2b7-201ENSMUST00000178258 520 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm42660-201ENSMUST00000197733 947 ntBASIC14.93□□□□□ -0.02
Ubr1O70481 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.93□□□□□ -0.02
Ubr1O70481 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Ubr1O70481 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm6040-201ENSMUST00000095430 857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ubr1O70481 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.92□□□□□ -0.02
Ubr1O70481 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ubr1O70481 AC174797.1-201ENSMUST00000224339 1649 ntBASIC14.92□□□□□ -0.02
Ubr1O70481 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms