Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm25700-201ENSMUST00000177693 110 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm28937-201ENSMUST00000185413 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm29400-201ENSMUST00000187208 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm28662-201ENSMUST00000188446 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm28251-201ENSMUST00000188835 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm37318-201ENSMUST00000194325 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm38017-201ENSMUST00000194768 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm37287-201ENSMUST00000195449 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm37793-201ENSMUST00000195548 695 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm38317-201ENSMUST00000195564 343 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm44364-201ENSMUST00000198368 141 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm43758-201ENSMUST00000199500 367 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm6450-201ENSMUST00000200896 574 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm18065-201ENSMUST00000221395 526 ntBASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfrsf11bO08712 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Gm20482-202ENSMUST00000174729 825 ntBASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfrsf11bO08712 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Gm14025-201ENSMUST00000145798 4242 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfrsf11bO08712 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms