Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm25053-201ENSMUST00000103982 133 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm25922-201ENSMUST00000104281 130 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm24679-201ENSMUST00000158762 111 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm17192-201ENSMUST00000169031 511 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm25053-202ENSMUST00000199731 132 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm43275-201ENSMUST00000202053 1020 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 AC153962.2-201ENSMUST00000219417 550 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm14005-208ENSMUST00000223654 681 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 C8g-202ENSMUST00000040042 1150 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm25604-201ENSMUST00000158359 133 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm7719-201ENSMUST00000182374 975 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Nmbr-206ENSMUST00000190114 662 ntTSL 3 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm34379-201ENSMUST00000195036 290 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Gm23105-201ENSMUST00000083719 134 ntBASIC10.53□□□□□ -0.72
Shank1D3YZU1 Tenm2-201ENSMUST00000057207 8298 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Shank1D3YZU1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.52□□□□□ -0.72
Shank1D3YZU1 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Shank1D3YZU1 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm18294-201ENSMUST00000176980 1748 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 AC238940.1-201ENSMUST00000225106 1858 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Shank1D3YZU1 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm6450-201ENSMUST00000200896 574 ntBASIC10.52□□□□□ -0.73
Shank1D3YZU1 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms