Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Scn7aB1AYL1 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn7aB1AYL1 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn7aB1AYL1 4930579F01Rik-202ENSMUST00000199293 1598 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Scn7aB1AYL1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm5944-201ENSMUST00000118182 1001 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm14993-201ENSMUST00000121180 164 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm27191-201ENSMUST00000145973 448 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 4930578M01Rik-201ENSMUST00000180490 907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Platr10-202ENSMUST00000191479 818 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ighv5-8-202ENSMUST00000191967 337 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 CT030166.5-201ENSMUST00000222249 420 ntBASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm9758-201ENSMUST00000035980 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 4930572O03Rik-201ENSMUST00000092696 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
Scn7aB1AYL1 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Gm18210-201ENSMUST00000209001 1524 ntBASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Gm22937-201ENSMUST00000103954 131 ntBASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Tnfrsf9-203ENSMUST00000105671 1278 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Snord55-201ENSMUST00000174939 79 ntBASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Tnfrsf9-202ENSMUST00000060901 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Gm8020-201ENSMUST00000170174 1406 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Ces2f-203ENSMUST00000212926 1430 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Scn7aB1AYL1 Ighv13-1-201ENSMUST00000103480 294 ntBASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Gm12986-201ENSMUST00000119037 967 ntBASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Gm5739-201ENSMUST00000208601 1703 ntBASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Gm42499-201ENSMUST00000196193 1412 ntBASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 AC167022.1-201ENSMUST00000218647 1458 ntBASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Scn7aB1AYL1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scn7aB1AYL1 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scn7aB1AYL1 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms