Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm4984-201ENSMUST00000115987 360 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm13570-201ENSMUST00000140763 309 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm12091-201ENSMUST00000146791 830 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm24644-201ENSMUST00000157114 139 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm8652-201ENSMUST00000181363 964 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm37201-201ENSMUST00000191845 523 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 AC125206.2-201ENSMUST00000217454 574 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm5356-201ENSMUST00000093326 615 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm12887B1AVM1 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm35850-202ENSMUST00000211705 2120 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm11960-201ENSMUST00000122068 925 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm13869-201ENSMUST00000146978 1054 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm6244-201ENSMUST00000178732 841 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm18018-201ENSMUST00000198273 408 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm2423-201ENSMUST00000074863 733 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm10268-201ENSMUST00000085340 555 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm12887B1AVM1 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms