Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm22109-201ENSMUST00000177995 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm22291-201ENSMUST00000178027 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm23284-201ENSMUST00000178069 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm25018-201ENSMUST00000179081 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm25212-201ENSMUST00000179432 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm26391-201ENSMUST00000179843 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm28651-201ENSMUST00000185335 644 ntTSL 3 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm9353-201ENSMUST00000200472 604 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 AC134601.2-201ENSMUST00000221071 130 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm24089-201ENSMUST00000093696 109 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.86□□□□□ -0.51
Col4a6B1AVK5 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 A230006K03Rik-202ENSMUST00000154958 901 ntTSL 5 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm23675-201ENSMUST00000157311 125 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm16165-201ENSMUST00000160140 795 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm9372-201ENSMUST00000168454 430 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm7985-201ENSMUST00000183329 981 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm43564-201ENSMUST00000196185 211 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 AC134537.1-201ENSMUST00000219205 265 ntBASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.85□□□□□ -0.51
Col4a6B1AVK5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms