Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Gm18986-201ENSMUST00000216029 1986 ntBASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Trav9n-2A0A0G2JDP3 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm22323-201ENSMUST00000103832 109 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm11511-201ENSMUST00000118146 540 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm25668-201ENSMUST00000157700 129 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm26361-201ENSMUST00000158868 186 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm17812-201ENSMUST00000204935 318 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm44262-201ENSMUST00000204969 372 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm8146-201ENSMUST00000192106 1847 ntBASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm11700-201ENSMUST00000119409 403 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm25890-201ENSMUST00000177643 165 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm22614-201ENSMUST00000178300 165 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm6114-201ENSMUST00000182472 968 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm27627-201ENSMUST00000183644 150 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm9678-201ENSMUST00000198979 1149 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 AC159205.5-202ENSMUST00000224849 386 ntBASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Trav9n-2A0A0G2JDP3 Gm22042-201ENSMUST00000082989 165 ntBASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms