Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trav8-1A0A075B641 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm8522-201ENSMUST00000118416 1929 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm11439-201ENSMUST00000118598 409 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm15429-201ENSMUST00000151268 798 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm7558-201ENSMUST00000193221 1165 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 AC169511.2-201ENSMUST00000226674 2063 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm43112-201ENSMUST00000196665 3122 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gm5403-201ENSMUST00000117105 2795 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Mlph-201ENSMUST00000027528 4499 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trav8-1A0A075B641 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Ano2-204ENSMUST00000160496 3925 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Ap2b1-201ENSMUST00000018875 5625 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm3836-201ENSMUST00000211377 1613 ntBASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm13126-201ENSMUST00000117079 3063 ntBASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm44872-201ENSMUST00000207864 420 ntBASIC8.36□□□□□ -1.07
Trav8-1A0A075B641 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms