Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Mrpl40Q9Z2Q5 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Mir1943-201ENSMUST00000158276 73 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm5523-201ENSMUST00000180415 997 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Spcs1-203ENSMUST00000226374 592 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm43522-201ENSMUST00000196697 1922 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.84□□□□□ -0.51
Mrpl40Q9Z2Q5 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Mrpl40Q9Z2Q5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 n-R5s14-201ENSMUST00000122688 107 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm18734-201ENSMUST00000172937 808 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 AU022133-201ENSMUST00000200601 873 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm45118-201ENSMUST00000208928 825 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 AC123619.2-202ENSMUST00000225097 1568 ntBASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Mrpl40Q9Z2Q5 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Mrpl40Q9Z2Q5 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms