Protein–RNA interactions for Protein: Q9Z2D8

Mbd3, Methyl-CpG-binding domain protein 3, mousemouse

Known RBP Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3Q9Z2D8 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm28937-201ENSMUST00000185413 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm29400-201ENSMUST00000187208 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm28662-201ENSMUST00000188446 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm28251-201ENSMUST00000188835 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm37424-201ENSMUST00000191727 561 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm37318-201ENSMUST00000194325 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm38017-201ENSMUST00000194768 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm37287-201ENSMUST00000195449 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm37793-201ENSMUST00000195548 695 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm6450-201ENSMUST00000200896 574 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm43962-201ENSMUST00000203898 190 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm45880-201ENSMUST00000213041 853 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm35850-202ENSMUST00000211705 2120 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Gm19178-201ENSMUST00000217524 1819 ntBASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Mbd3Q9Z2D8 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Trmt2a-207ENSMUST00000140206 3520 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Gm8885-201ENSMUST00000189382 598 ntBASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Gm10608-202ENSMUST00000213924 676 ntBASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Mbd3Q9Z2D8 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gtf2i-216ENSMUST00000173888 2820 ntTSL 5 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm23270-201ENSMUST00000104055 131 ntBASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm15370-201ENSMUST00000117158 253 ntBASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC14.85□□□□□ -0.03
Mbd3Q9Z2D8 Gm14726-201ENSMUST00000120623 896 ntBASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms