Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm14071-201ENSMUST00000117817 509 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm6905-201ENSMUST00000205729 511 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Upk3aQ9JKX8 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm15566-201ENSMUST00000121130 590 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm5732-201ENSMUST00000182596 1007 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Mir7070-201ENSMUST00000183657 86 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm29499-201ENSMUST00000189151 486 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm28329-201ENSMUST00000191208 689 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm29171-201ENSMUST00000191397 486 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm37835-201ENSMUST00000193305 361 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm1821-202ENSMUST00000227415 750 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm4978-201ENSMUST00000071565 801 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.28□□□□□ -0.6
Upk3aQ9JKX8 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Upk3aQ9JKX8 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Gm20495-201ENSMUST00000173902 235 ntBASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Upk3aQ9JKX8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms