Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm24196-201ENSMUST00000179161 110 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm17794-201ENSMUST00000220252 955 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm10012-201ENSMUST00000078252 192 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Gm12799-201ENSMUST00000118151 2560 ntBASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Hmgn3Q9DCB1 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 AC164161.2-201ENSMUST00000217446 1730 ntTSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm37333-201ENSMUST00000192904 2251 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm24934-201ENSMUST00000103764 111 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 4632415L05Rik-202ENSMUST00000198527 4087 ntBASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Hmgn3Q9DCB1 Ptpn23-201ENSMUST00000040021 5346 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm12138-201ENSMUST00000122180 951 ntBASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm27892-201ENSMUST00000185017 106 ntBASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11□□□□□ -0.65
Hmgn3Q9DCB1 Gm13050-201ENSMUST00000122149 1345 ntBASIC11□□□□□ -0.65
Hmgn3Q9DCB1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms