Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cdc40Q9DC48 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12616-201ENSMUST00000118594 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm15610-201ENSMUST00000120584 195 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 n-R5s14-201ENSMUST00000122688 107 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm5616-201ENSMUST00000165252 384 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm8741-201ENSMUST00000174736 384 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12624-201ENSMUST00000177615 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12621-201ENSMUST00000177760 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12615-201ENSMUST00000177970 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12622-201ENSMUST00000177975 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12627-201ENSMUST00000178412 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12625-201ENSMUST00000179122 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12614-201ENSMUST00000179586 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm12613-201ENSMUST00000180323 382 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm5523-201ENSMUST00000180415 997 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 AU022133-201ENSMUST00000200601 873 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm7848-201ENSMUST00000210739 718 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm8522-201ENSMUST00000118416 1929 ntBASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cdc40Q9DC48 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Map1b-203ENSMUST00000223725 2669 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Mir7677-201ENSMUST00000184226 67 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm18038-201ENSMUST00000197900 485 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Gm21027-201ENSMUST00000219300 1236 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Cdc40Q9DC48 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms