Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm8502-201ENSMUST00000185708 901 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm21147-201ENSMUST00000186046 913 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm8510-201ENSMUST00000189202 895 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm2316-201ENSMUST00000190613 921 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm42937-201ENSMUST00000197360 752 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Gm17244-201ENSMUST00000192482 3416 ntBASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Nop56Q9D6Z1 Slc22a14-201ENSMUST00000093775 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 CT010486.3-201ENSMUST00000224555 811 ntBASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.15□□□□□ -0.46
Nop56Q9D6Z1 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Kcnh5-201ENSMUST00000042299 4058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.15□□□□□ -0.47
Nop56Q9D6Z1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Gm43579-201ENSMUST00000202387 1307 ntBASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Myh13-203ENSMUST00000180845 5991 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Nop56Q9D6Z1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms