Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm13611-201ENSMUST00000118269 318 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm13315-201ENSMUST00000120376 991 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm29615-201ENSMUST00000185371 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28224-201ENSMUST00000186078 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm29001-201ENSMUST00000186177 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28292-201ENSMUST00000186593 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28101-201ENSMUST00000187608 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm29076-201ENSMUST00000187689 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28302-201ENSMUST00000187931 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28646-201ENSMUST00000188220 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28205-201ENSMUST00000189177 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm29032-201ENSMUST00000189797 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm28695-201ENSMUST00000190300 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm37448-201ENSMUST00000192795 697 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC13.2□□□□□ -0.3
Smc1aQ9CU62 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 n-R5s14-201ENSMUST00000122688 107 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm27627-201ENSMUST00000183644 150 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Spcs1-203ENSMUST00000226374 592 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smc1aQ9CU62 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms