Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Triml2-201ENSMUST00000163869 1467 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldnd1Q9CQX5 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm44942-201ENSMUST00000096093 2072 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Mir453-201ENSMUST00000104732 82 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm11957-201ENSMUST00000118304 779 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm6630-201ENSMUST00000119199 454 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm15549-201ENSMUST00000121595 622 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm25998-201ENSMUST00000175397 53 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm37365-201ENSMUST00000193109 409 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm26670-202ENSMUST00000226862 340 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldnd1Q9CQX5 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm6831-202ENSMUST00000213025 1673 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm37600-201ENSMUST00000193764 3292 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm15329-201ENSMUST00000121408 155 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm25492-201ENSMUST00000157383 129 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Mir8093-201ENSMUST00000185043 137 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm44507-201ENSMUST00000206249 343 ntTSL 5 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm12474-201ENSMUST00000122898 1410 ntTSL 2 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Cldnd1Q9CQX5 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cldnd1Q9CQX5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.7 ms