Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Trim16Q99PP9 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.52□□□□□ -0.56
Trim16Q99PP9 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Trim16Q99PP9 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm27390-201ENSMUST00000184516 176 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm9230-201ENSMUST00000188228 532 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm19187-201ENSMUST00000206781 892 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.52□□□□□ -0.57
Trim16Q99PP9 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.52□□□□□ -0.57
Trim16Q99PP9 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm12749-201ENSMUST00000122138 1159 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Rprl1-201ENSMUST00000158050 327 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Rprl1-202ENSMUST00000198476 238 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.51□□□□□ -0.57
Trim16Q99PP9 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Trim16Q99PP9 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms