Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Nsmce2-203ENSMUST00000227173 1122 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Cep70-207ENSMUST00000190715 1768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm17225-201ENSMUST00000172051 497 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 CT009550.1-201ENSMUST00000225750 864 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm9701-201ENSMUST00000077976 427 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Ifnl3-201ENSMUST00000078364 582 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm27196-201ENSMUST00000184787 2582 ntBASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh23Q99PF4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm9-201ENSMUST00000101636 817 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Mir1190-201ENSMUST00000116925 96 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 1700095J12Rik-201ENSMUST00000124620 737 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm26047-201ENSMUST00000157308 113 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm26119-201ENSMUST00000175601 104 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm26047-202ENSMUST00000198840 115 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Krtap6-3-201ENSMUST00000079151 444 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Adora1-201ENSMUST00000038191 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm14071-201ENSMUST00000117817 509 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm11544-201ENSMUST00000120215 382 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm14633-201ENSMUST00000121152 470 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm18733-202ENSMUST00000174447 401 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Mir3091-201ENSMUST00000175086 76 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm2566-201ENSMUST00000201267 431 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 4930553M12Rik-201ENSMUST00000057837 498 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm8618-201ENSMUST00000097570 432 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm30504-201ENSMUST00000209316 1688 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Rarres2-203ENSMUST00000204182 672 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 AC154347.2-201ENSMUST00000221223 715 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Ankrd45-201ENSMUST00000052245 849 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Larp1b-204ENSMUST00000099121 1030 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh23Q99PF4 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh23Q99PF4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh23Q99PF4 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh23Q99PF4 Gm38034-201ENSMUST00000193915 2069 ntBASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms