Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Raf1Q99N57 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.62□□□□□ -0.71
Raf1Q99N57 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Raf1Q99N57 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.62□□□□□ -0.71
Raf1Q99N57 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Raf1Q99N57 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Raf1Q99N57 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.61□□□□□ -0.71
Raf1Q99N57 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 AC154314.2-201ENSMUST00000223677 3502 ntBASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm14726-201ENSMUST00000120623 896 ntBASIC10.61□□□□□ -0.71
Raf1Q99N57 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm31256-201ENSMUST00000194705 506 ntBASIC10.61□□□□□ -0.71
Raf1Q99N57 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm30285-201ENSMUST00000214614 422 ntBASIC10.61□□□□□ -0.71
Raf1Q99N57 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC10.61□□□□□ -0.71
Raf1Q99N57 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Raf1Q99N57 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm15172-201ENSMUST00000118945 1046 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm12176-201ENSMUST00000121420 875 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Mir6979-201ENSMUST00000183927 56 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm2260-201ENSMUST00000184965 657 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm22058-201ENSMUST00000083393 310 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.6□□□□□ -0.71
Raf1Q99N57 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms