Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm14441-201ENSMUST00000121960 540 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm13786-201ENSMUST00000122371 333 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm9230-201ENSMUST00000188228 532 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm37424-201ENSMUST00000191727 561 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm18062-201ENSMUST00000208020 547 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm18055-201ENSMUST00000208254 547 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 AC132384.14-201ENSMUST00000219346 1147 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 AC166349.1-201ENSMUST00000220866 695 ntBASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkd1Q99MH6 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm11700-201ENSMUST00000119409 403 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm15547-201ENSMUST00000122152 333 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm8062-201ENSMUST00000139696 444 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm43438-201ENSMUST00000198133 379 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm30285-201ENSMUST00000214614 422 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Nkd1Q99MH6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms