Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
RtcbQ99LF4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Kcnk16-202ENSMUST00000225596 2127 ntBASIC14.48□□□□□ -0.09
RtcbQ99LF4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.48□□□□□ -0.09
RtcbQ99LF4 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Mir453-201ENSMUST00000104732 82 ntBASIC14.48□□□□□ -0.09
RtcbQ99LF4 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC14.48□□□□□ -0.09
RtcbQ99LF4 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm44216-201ENSMUST00000203942 157 ntBASIC14.48□□□□□ -0.09
RtcbQ99LF4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RtcbQ99LF4 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm11996-201ENSMUST00000117538 915 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm37852-201ENSMUST00000193027 350 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm37284-201ENSMUST00000193607 539 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm3318-201ENSMUST00000217604 1183 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Rab3c-202ENSMUST00000223922 2398 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.47□□□□□ -0.09
RtcbQ99LF4 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RtcbQ99LF4 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm22594-201ENSMUST00000104251 130 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm23694-201ENSMUST00000179335 110 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Mir7051-201ENSMUST00000184167 73 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm42430-201ENSMUST00000197209 616 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Trav11n-201ENSMUST00000200113 343 ntBASIC14.46□□□□□ -0.09
RtcbQ99LF4 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms