Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm37466-201ENSMUST00000195692 652 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm18065-201ENSMUST00000221395 526 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Gm807-202ENSMUST00000224929 408 ntBASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Pcdhb1Q91Y08 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Pcdhb1Q91Y08 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm12857-201ENSMUST00000117678 592 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm15207-201ENSMUST00000119259 442 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm28686-201ENSMUST00000187404 609 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm5982-201ENSMUST00000196234 512 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Gm7940-201ENSMUST00000218195 769 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Lect2-202ENSMUST00000225183 823 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhb1Q91Y08 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Paupar-201ENSMUST00000194826 3482 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Mir877-201ENSMUST00000104738 85 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm29199-201ENSMUST00000187766 775 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm8385-201ENSMUST00000058999 643 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhb1Q91Y08 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 172.3 ms