Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pcdhga11Q91XY8 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm11989-201ENSMUST00000117240 672 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm15236-201ENSMUST00000117309 379 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm11362-201ENSMUST00000118838 850 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm12164-201ENSMUST00000121695 551 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm18056-201ENSMUST00000207670 568 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm18061-201ENSMUST00000208350 562 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm18063-201ENSMUST00000208529 568 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm18052-201ENSMUST00000208750 559 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pcdhga11Q91XY8 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm7722-201ENSMUST00000120646 741 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm11434-201ENSMUST00000122379 629 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm9136-201ENSMUST00000193368 454 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm18893-201ENSMUST00000198416 943 ntBASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Pcdhga11Q91XY8 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms