Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm5070-201ENSMUST00000177599 862 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm8885-201ENSMUST00000189382 598 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm19187-201ENSMUST00000206781 892 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm8862-201ENSMUST00000198379 1346 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gm6189-201ENSMUST00000164487 2082 ntBASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Pcdhga3Q91XY5 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdhga3Q91XY5 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pcdhga3Q91XY5 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm11989-201ENSMUST00000117240 672 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm11362-201ENSMUST00000118838 850 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm7783-201ENSMUST00000204795 781 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC10.52□□□□□ -0.73
Pcdhga3Q91XY5 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Gm15610-201ENSMUST00000120584 195 ntBASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pcdhga3Q91XY5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms