Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Cchcr1Q8K2I2 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm24255-201ENSMUST00000104481 128 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm14381-201ENSMUST00000122105 414 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 AA914427-201ENSMUST00000193194 1166 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm38317-201ENSMUST00000195564 343 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm44364-201ENSMUST00000198368 141 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Lect2-202ENSMUST00000225183 823 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm17230-201ENSMUST00000171194 3942 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Gm43908-201ENSMUST00000205074 1472 ntBASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Cchcr1Q8K2I2 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm20482-202ENSMUST00000174729 825 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm8343-201ENSMUST00000182705 994 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm38341-201ENSMUST00000195357 515 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm6450-201ENSMUST00000200896 574 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm3961-201ENSMUST00000204425 994 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm4157-201ENSMUST00000211647 679 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Gm18065-201ENSMUST00000221395 526 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Cchcr1Q8K2I2 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms