Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Gm13045-201ENSMUST00000119019 712 ntBASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Gm19353-201ENSMUST00000184561 445 ntBASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Vps53Q8CCB4 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Vps53Q8CCB4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm8522-201ENSMUST00000118416 1929 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm14247-201ENSMUST00000120950 237 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm12208-201ENSMUST00000122004 163 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Rprl1-201ENSMUST00000158050 327 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm44126-201ENSMUST00000204831 514 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Arhgef3-204ENSMUST00000225949 3198 ntBASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Vps53Q8CCB4 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm12165-201ENSMUST00000117047 342 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm11628-201ENSMUST00000117568 171 ntBASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.69□□□□□ -0.22
Vps53Q8CCB4 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms