Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm27731-201ENSMUST00000185192 107 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Lysmd4Q8CC84 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Mir1247-201ENSMUST00000116706 82 ntBASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Lysmd4Q8CC84 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm10434-201ENSMUST00000101158 471 ntBASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm13226-201ENSMUST00000117838 404 ntBASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm14660-201ENSMUST00000119809 575 ntBASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.5□□□□□ -0.73
Lysmd4Q8CC84 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms