Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Gm8574-201ENSMUST00000203207 924 ntBASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Gm44755-201ENSMUST00000207830 2102 ntBASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Alx1Q8C8B0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm15573-201ENSMUST00000119487 540 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm11244-201ENSMUST00000121243 237 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm15881-201ENSMUST00000148792 942 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm3329-201ENSMUST00000159873 556 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm42997-202ENSMUST00000200321 985 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm7504-201ENSMUST00000201449 424 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm43852-201ENSMUST00000202098 917 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm43966-201ENSMUST00000203301 612 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Alx1Q8C8B0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm12247-201ENSMUST00000117585 670 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm11949-201ENSMUST00000117640 372 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm43186-201ENSMUST00000198130 824 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm8959-201ENSMUST00000213150 571 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 CT573047.1-201ENSMUST00000223652 851 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Alx1Q8C8B0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Alx1Q8C8B0 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms