Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gm5380-201ENSMUST00000119296 2136 ntBASIC13.73□□□□□ -0.21
Usp44Q8C2S0 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Usp44Q8C2S0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm4978-201ENSMUST00000071565 801 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Usp44Q8C2S0 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Gm19208-201ENSMUST00000213861 912 ntBASIC13.71□□□□□ -0.21
Usp44Q8C2S0 AC164437.3-201ENSMUST00000228323 347 ntBASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Usp44Q8C2S0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.71□□□□□ -0.22
Usp44Q8C2S0 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm44573-201ENSMUST00000191753 2370 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm14193-201ENSMUST00000105067 153 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm13045-201ENSMUST00000119019 712 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm15566-201ENSMUST00000121130 590 ntBASIC13.7□□□□□ -0.22
Usp44Q8C2S0 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 122 ms