Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Sh3rf2Q8BZT2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Sh3rf2Q8BZT2 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm12419-201ENSMUST00000116649 636 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm12516-201ENSMUST00000120819 385 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm10807-201ENSMUST00000177134 795 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Mir8093-201ENSMUST00000185043 137 ntBASIC11.9□□□□□ -0.5
Sh3rf2Q8BZT2 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms