Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Gm8574-201ENSMUST00000203207 924 ntBASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 AC102368.1-201ENSMUST00000227161 892 ntBASIC12.46□□□□□ -0.41
Rd3Q8BRE0 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Rd3Q8BRE0 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Rd3Q8BRE0 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Gm7593-201ENSMUST00000187246 644 ntBASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Gm19166-201ENSMUST00000196041 1063 ntBASIC12.45□□□□□ -0.42
Rd3Q8BRE0 AC136986.1-201ENSMUST00000222829 380 ntTSL 2 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Rd3Q8BRE0 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm44315-201ENSMUST00000203041 219 ntBASIC12.44□□□□□ -0.42
Rd3Q8BRE0 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Rd3Q8BRE0 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms