Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm43184-201ENSMUST00000197247 542 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 AU022133-201ENSMUST00000200601 873 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm9445-201ENSMUST00000207454 1285 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Mettl6-204ENSMUST00000227595 1027 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 Gm5705-201ENSMUST00000066241 711 ntBASIC10.21□□□□□ -0.77
Srrm4Q8BKA3 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Srrm4Q8BKA3 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm23596-201ENSMUST00000104304 132 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm11509-201ENSMUST00000117358 325 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm15004-201ENSMUST00000119192 630 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm12036-201ENSMUST00000120008 530 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm25732-201ENSMUST00000175168 60 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm7537-201ENSMUST00000221660 1414 ntBASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Srrm4Q8BKA3 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.19□□□□□ -0.78
Srrm4Q8BKA3 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms