Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm24891-201ENSMUST00000104391 136 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm13888-201ENSMUST00000119148 422 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 AC166992.1-201ENSMUST00000216356 565 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm26448-201ENSMUST00000082446 203 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
SynbQ8BI41 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.3□□□□□ -0.6
SynbQ8BI41 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.3□□□□□ -0.6
SynbQ8BI41 CT025681.1-201ENSMUST00000225453 1855 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm14460-201ENSMUST00000121511 639 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm23119-201ENSMUST00000158610 140 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm8194-201ENSMUST00000159783 859 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm9022-201ENSMUST00000182482 992 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm5455-201ENSMUST00000058710 715 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Ginm1-202ENSMUST00000065124 300 ntBASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SynbQ8BI41 4930523C07Rik-202ENSMUST00000097513 300 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
SynbQ8BI41 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SynbQ8BI41 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.28□□□□□ -0.6
SynbQ8BI41 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.28□□□□□ -0.6
SynbQ8BI41 Slc30a8-201ENSMUST00000037240 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SynbQ8BI41 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms