Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Adra1a-206ENSMUST00000225182 2337 ntBASIC13□□□□□ -0.33
Usp6nlQ80XC3 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Usp6nlQ80XC3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gm13600-201ENSMUST00000117949 744 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 AC134869.4-202ENSMUST00000224350 837 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 AC164437.3-201ENSMUST00000228323 347 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gm23105-201ENSMUST00000083719 134 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Usp6nlQ80XC3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm1840-201ENSMUST00000051687 1432 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm12036-201ENSMUST00000120008 530 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm14441-201ENSMUST00000121960 540 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Usp6nlQ80XC3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms