Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccdc116Q80X53 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccdc116Q80X53 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm13296-201ENSMUST00000117854 997 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm14381-201ENSMUST00000122105 414 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm15276-201ENSMUST00000145953 498 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm17376-201ENSMUST00000166016 84 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm7584-201ENSMUST00000175829 940 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm21156-201ENSMUST00000189693 869 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Ighv1-62-201ENSMUST00000193406 350 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm44364-201ENSMUST00000198368 141 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm3961-201ENSMUST00000204425 994 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Erich3-203ENSMUST00000189969 3460 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.54□□□□□ -0.56
Ccdc116Q80X53 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.54□□□□□ -0.56
Ccdc116Q80X53 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm5616-201ENSMUST00000165252 384 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm8741-201ENSMUST00000174736 384 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm43002-201ENSMUST00000200310 155 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Epb41l3-202ENSMUST00000112680 4073 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccdc116Q80X53 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Ccdc116Q80X53 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc116Q80X53 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc116Q80X53 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ccdc116Q80X53 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.52□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms