Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm5733-201ENSMUST00000190232 939 ntBASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm43752-201ENSMUST00000198475 697 ntBASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm9139-201ENSMUST00000218817 700 ntBASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm10548-201ENSMUST00000097631 2629 ntBASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Gm43858-201ENSMUST00000199418 1778 ntBASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Prpf38bQ80SY5 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm9387-201ENSMUST00000098624 1320 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm15703-201ENSMUST00000120250 880 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm40332-201ENSMUST00000199847 938 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm42449-201ENSMUST00000200349 2258 ntBASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Prpf38bQ80SY5 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm15573-201ENSMUST00000119487 540 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Prpf38bQ80SY5 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms