Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd1Q6PIP5 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.89□□□□□ -0.51
Nudcd1Q6PIP5 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd1Q6PIP5 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd1Q6PIP5 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Nudcd1Q6PIP5 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm15566-201ENSMUST00000121130 590 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Gm8285-201ENSMUST00000208293 759 ntBASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Nudcd1Q6PIP5 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Map1b-203ENSMUST00000223725 2669 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm22711-201ENSMUST00000116890 133 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm8731-201ENSMUST00000118088 412 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm15352-201ENSMUST00000118696 270 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm8737-201ENSMUST00000122208 642 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm27390-201ENSMUST00000184516 176 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm5852-201ENSMUST00000194119 1021 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm42599-201ENSMUST00000201308 469 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm6108-201ENSMUST00000208365 367 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm4797-201ENSMUST00000219075 1283 ntBASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Nudcd1Q6PIP5 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms