Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slx4Q6P1D7 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm15707-201ENSMUST00000118804 996 ntBASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm5335-201ENSMUST00000182995 1000 ntBASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm37207-201ENSMUST00000194284 296 ntBASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Gm12912-201ENSMUST00000121596 1381 ntBASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slx4Q6P1D7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm8302-201ENSMUST00000119217 852 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm19013-201ENSMUST00000183895 1222 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm19014-201ENSMUST00000184828 1189 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm2345-201ENSMUST00000193451 589 ntBASIC17.79■□□□□ 0.44
Slx4Q6P1D7 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC17.79■□□□□ 0.44
Slx4Q6P1D7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 AC022682.1-201ENSMUST00000224624 2023 ntBASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 AC137950.2-202ENSMUST00000227150 1635 ntBASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Tmem91-203ENSMUST00000108405 550 ntTSL 3 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 AC134601.2-201ENSMUST00000221071 130 ntBASIC17.78■□□□□ 0.44
Slx4Q6P1D7 CT010486.3-201ENSMUST00000224555 811 ntBASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slx4Q6P1D7 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Slx4Q6P1D7 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms